Papers

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Dota 2 with Large Scale Deep Reinforcement Learning

OpenAI, :, Christopher Berner, Greg Brockman, Brooke Chan, Vicki Cheung, Dębiak, Przemysław, Christy Dennison et al.

arXiv (Cornell University) 2019 cited by 969

Software & Coding Artificial Intelligence in Games solved importance 6/10 scale stated

No AI system could defeat world champions at Dota 2, an esports game with long time horizons, imperfect information and complex continuous state-action spaces.

Details Source Open-access PDF model: OpenAI Five (self-play reinforcement learn...

Scientific Domain Knowledge Improves Exoplanet Transit Classification with Deep Learning

Megan Ansdell, Yani Ioannou, Hugh P. Osborn, Michele Sasdelli, (2018 NASA Frontier Development Lab Exoplanet Team), Jeffrey C. Smith, Douglas Caldwell, Jon M. Jenkins et al.

The Astrophysical Journal Letters 2018 cited by 77

Physics & Astronomy Stellar, planetary, and galactic studies ai assisted importance 6/10 scale stated

Space missions like Kepler and TESS produce large datasets of transit signals that must be efficiently and systematically classified as exoplanets or false positives.

Details Source Open-access PDF model: Deep learning model per Shallue & Vanderbu...

Automatically identifying, counting, and describing wild animals in camera-trap images with deep learning

Mohammad Sadegh Norouzzadeh, Anh Nguyen, Margaret Kosmala, Alexandra Swanson, Meredith S. Palmer, Craig Packer, Jeff Clune

Proceedings of the National Academy of Sciences 2018 cited by 1,211

Biology & Life Sciences Advanced Neural Network Applications solved importance 6/10 scale stated

Extracting information from millions of camera-trap wildlife images is expensive, time-consuming manual work.

Details Source Open-access PDF model: deep convolutional neural networks (specif...

Basset: learning the regulatory code of the accessible genome with deep convolutional neural networks

David R. Kelley, Jasper Snoek, John L. Rinn

Genome Research 2016 cited by 1,047

Biology & Life Sciences Genomics and Chromatin Dynamics ai assisted importance 6/10 scale stated

The functional mechanisms of most disease-associated noncoding genetic variants are unknown, and the regulatory code of gene expression is incompletely understood.

Details Source Open-access PDF model: Basset (deep convolutional neural network)

Machine Learning-Guided Optimization of p -Coumaric Acid Production in Yeast

Sara Moreno Paz, Rianne van der Hoek, Elif Eliana, Priscilla Zwartjens, S. Gosiewska, Vítor A. P. Martins dos Santos, Joep P. J. Schmitz, Maria Suarez Diez

ACS Synthetic Biology 2024 cited by 40

Biology & Life Sciences Microbial Metabolic Engineering and Bioproduction solved importance 6/10 scale stated

Optimizing microbial cell factories (p-coumaric acid production in yeast) through DBTL cycles is slow without effective links between phases.

Details Source Open-access PDF model: not stated in source

Deep learning the cis-regulatory code for gene expression in selected model plants

Fritz Forbang Peleke, Simon Maria Zumkeller, Mehmet Gültaş, Armin Otto Schmitt, Jędrzej Szymański

Nature Communications 2024 cited by 86

Biology & Life Sciences Genomics and Chromatin Dynamics partially solved importance 6/10 scale stated

Understanding how non-coding regulatory DNA sequences determine gene expression levels in four plant species, including linking genetic variation to expression changes.

Details Source Open-access PDF model: not stated in source

Deep structured learning for variant prioritization in Mendelian diseases

Matt Christopher Danzi, Maike Franziska Dohrn, Sarah Fazal, Danique Beijer, Adriana P. Rebelo, Vívian Pedigone Cintra, Stephan L. Zuchner

Nature Communications 2023 cited by 43

Medicine & Health Genomics and Rare Diseases solved importance 6/10 scale stated

Identifying the disease-causing genetic variant among many candidates in Mendelian diseases is slow and difficult.

Details Source Open-access PDF model: MAVERICK (transformer-based ensemble, Kera...

Mathematical discoveries from program search with large language models

Bernardino Romera‐Paredes, Mohammadamin Barekatain, Alexander Novikov, Matej Balog, Manish Kumar, Emilien Dupont, Francisco J. R. Ruiz, Jordan S. Ellenberg et al.

Nature 2023 cited by 509

Mathematics Evolutionary Algorithms and Applications solved importance 6/10 scale stated

LLM confabulations hinder scientific discovery, and the cap set problem in extremal combinatorics lacked constructions beyond the best-known ones.

Details Source Open-access PDF model: FunSearch (pretrained LLM paired with syst...

Fast and scalable search of whole-slide images via self-supervised deep learning

Chengkuan Chen, Ming Y. Lu, Drew F. K. Williamson, Tiffany Chen, Andrew J. Schaumberg, Faisal Mahmood

Nature Biomedical Engineering 2022 cited by 126

Medicine & Health AI in cancer detection solved importance 6/10 scale stated

Searching large repositories of gigapixel whole-slide images for morphologically similar slides was too slow because retrieval speed scaled with repository size.

Details Source Open-access PDF model: SISH (self-supervised deep learning)

Swarm learning for decentralized artificial intelligence in cancer histopathology

Oliver Lester Saldanha, Philip Quirke, Nicholas Paul West, Jacqueline A. James, Maurice Bernard Loughrey, Heike Irmgard Grabsch, Manuel Salto‐Tellez, Elizabeth Alwers et al.

Nature Medicine 2022 cited by 224

Medicine & Health AI in cancer detection partially solved importance 6/10 scale stated

Training robust AI on medical images needs large multicentric datasets that face practical, ethical and legal obstacles to sharing.

Details Source Open-access PDF model: not stated in source

Automated machine learning for endemic active tuberculosis prediction from multiplex serological data

Hooman H. Rashidi, Luke T. Dang, Samer Albahra, Resmi K. Ravindran, Imran H. Khan

Scientific Reports 2021 cited by 22

Medicine & Health Tuberculosis Research and Epidemiology ai assisted importance 6/10 scale stated

Active tuberculosis serological diagnosis requires interpreting complex multi-antibody data across variable immune responses, and building suitable algorithms manually is slow.

Details Source Open-access PDF model: MILO (Machine Intelligence Learning Optimi...

Accurate diagnosis of lymphoma on whole-slide histopathology images using deep learning

Charlotte Syrykh, Arnaud Abreu, Nadia Amara, Aurore Siegfried, V. Maisongrosse, François-Xavier Frénois, Laurent Martin, Cédric Rossi et al.

npj Digital Medicine 2020 cited by 115

Medicine & Health AI in cancer detection partially solved importance 6/10 scale stated

Histopathological diagnosis of lymphomas, especially follicular lymphoma, is challenging, requires expertise or centralized review, and depends on tissue-section technical quality.

Details Source Open-access PDF model: Bayesian neural networks (BNN)

Deep learning enables structured illumination microscopy with low light levels and enhanced speed

Luhong Jin, Bei Liu, Fenqiang Zhao, Stephen Hahn, Bowei Dong, Ruiyan Song, Timothy C. Elston, Yingke Xu et al.

Nature Communications 2020 cited by 253

Biology & Life Sciences Advanced Fluorescence Microscopy Techniques solved importance 6/10 scale stated

Structured illumination microscopy needs intense illumination and many acquisitions per image, causing photobleaching and limiting live-cell super-resolution imaging.

Details Source Open-access PDF model: deep neural networks (not named)

Predicting day-ahead solar irradiance through gated recurrent unit using weather forecasting data

Bixuan Gao, Xiaoqiao Huang, Junsheng Shi, Yonghang Tai, Rui Xiao

Journal of Renewable and Sustainable Energy 2019 cited by 51

Climate & Environment Solar Radiation and Photovoltaics solved importance 6/10 scale stated

Solar power operators need accurate day-ahead irradiance forecasts for planning, scheduling and managing photovoltaic plants and grid-connected systems.

Details Source model: Gated recurrent unit (GRU)

Deep learning enhanced light sheet fluorescence microscopy for in vivo 4D imaging of zebrafish heart beating

Meng Zhang, Renjian Li, Songnian Fu, Sunil Kumar, James McGinty, Yuwen Qin, Lingling Chen

Light Science & Applications 2025 cited by 22

Biology & Life Sciences Advanced Fluorescence Microscopy Techniques solved importance 6/10 scale stated

Time-resolved volumetric fluorescence imaging over extended durations is limited by the trade-off among imaging speed, light exposure, illumination power and image quality.

Details Source Open-access PDF model: UI-Trans (U-net integrated transformer)

Validating the accuracy of deep learning for the diagnosis of pneumonia on chest x-ray against a robust multimodal reference diagnosis: a post hoc analysis of two prospective studies

Jérémy Hofmeister, Nicolás Garin, Xavier Montet, Max Scheffler, Alexandra Platon, Pierre‐Alexandre Poletti, Jérôme Stirnemann, Marie‐Pierre Debray et al.

European Radiology Experimental 2024 cited by 25

Medicine & Health COVID-19 diagnosis using AI ai assisted importance 6/10 scale stated

Deep learning pneumonia diagnosis on chest X-rays had mainly been validated against radiologists, whose own diagnoses can be inaccurate, so accuracy was tested against a robust multimodal expert reference.

Details Source Open-access PDF model: deep learning convolutional neural network

Machine Learning as a Tool for Hypothesis Generation

Jens Ludwig, Sendhil Mullainathan

The Quarterly Journal of Economics 2024 cited by 85

Research & Humanities Explainable Artificial Intelligence (XAI) ai assisted importance 6/10 scale stated

Hypothesis generation in social science remains informal; specifically, understanding what facial features drive judges' jailing decisions.

Details Source model: not stated in source

Deep model predictive control of gene expression in thousands of single cells

Jean‐Baptiste Lugagne, Caroline M. Blassick, Mary J. Dunlop

Nature Communications 2024 cited by 38

Biology & Life Sciences Gene Regulatory Network Analysis solved importance 6/10 scale stated

Researchers could only passively observe natural gene expression dynamics in cells; they needed a way to actively impose specific, cell-specific expression dynamics in individual live cells.

Details Source Open-access PDF model: deep neural network in a deep model predic...

Polymer design via SHAP and Bayesian machine learning optimizes pDNA and CRISPR ribonucleoprotein delivery

Rishad J. Dalal, Felipe Oviedo, Michael C. Leyden, Theresa M. Reineke

Chemical Science 2024 cited by 47

Medicine & Health RNA Interference and Gene Delivery ai assisted importance 6/10 scale stated

Designing polymer carriers that efficiently deliver pDNA and CRISPR-Cas9 ribonucleoprotein into cells is hard because the structure-property relationships in combinatorial polymer libraries are complex and poorly understood.

Details Source Open-access PDF model: SHAP explainable ML; Bayesian optimization

Deep learning enhancing guide RNA design for CRISPR/Cas12a‐based diagnostics

Baicheng Huang, Ling Guo, Hang Yin, Yue Wu, Zihan Zeng, Sujie Xu, Yufeng Lou, Zhimin Ai et al.

iMeta 2024 cited by 63

Biology & Life Sciences CRISPR and Genetic Engineering ai assisted importance 6/10 scale stated

Designing effective crRNA guides for Cas12a-based nucleic acid detection is challenging and time-consuming, slowing development of rapid pathogen tests.

Details Source Open-access PDF model: Optimized convolutional neural network (Ea...

Accurate Prediction of Protein Structural Flexibility by Deep Learning Integrating Intricate Atomic Structures and Cryo-EM Density Information

Xintao Song, Lei Bao, Chenjie Feng, Qiang Huang, Fa Zhang, Xin Gao, Renmin Han

Nature Communications 2024 cited by 87

Biology & Life Sciences Protein Structure and Dynamics partially solved importance 6/10 scale stated

Computationally predicting protein structural flexibility/dynamics was challenging and existing methods were inaccurate.

Details Source Open-access PDF model: RMSF-net

Prediction of base editor off-targets by deep learning

Chengdong Zhang, Yuan Yang, Tao Qi, Yuening Zhang, Linghui Hou, Jingjing Wei, Jingcheng Yang, Leming M. Shi et al.

Nature Communications 2023 cited by 39

Biology & Life Sciences CRISPR and Genetic Engineering partially solved importance 6/10 scale stated

Base editors frequently induce unwanted Cas9-dependent off-target DNA mutations, and researchers lacked tools to predict where these off-targets occur.

Details Source Open-access PDF model: ABEdeepoff and CBEdeepoff (deep learning m...

Deep learning integrates histopathology and proteogenomics at a pan-cancer level

Joshua M. Wang, Runyu Hong, Elizabeth G. Demicco, Jimin Tan, Rossana Lazcano, Andre Luis Moreira, Yize Li, Anna Pamela Calinawan et al.

Cell Reports Medicine 2023 cited by 41

Medicine & Health AI in cancer detection ai assisted importance 6/10 scale stated

Predicting clinical outcomes and molecular features (e.g., TP53 status) from routine H&E pathology slides alone, and explaining which histology features are predictive, was difficult.

Details Source Open-access PDF model: not stated in source