Predicting malaria epidemics in Burkina Faso with machine learning

David Harvey, Wessel Valkenburg, Amara Amara

PLoS ONE 2021 article cited by 34

importance 7/10 partially solved Malaria Research and Control malaria surveillance stage: research

Malaria outbreaks in Burkina Faso previously required complicated numerical transmission simulations, preventing simple data-driven early warning.

Accurate case-rate forecasts would let decision makers intervene months before an outbreak, potentially saving lives.

Gaussian Processes and Random Forest Regressors trained on high-fidelity IeDA infant consultation data estimate weekly malaria cases over a 13-week horizon, tested on historical epidemics.

At lowest alert threshold: 30% precision with >99% recall; rises to >99% precision and 5% rec… (abstract truncated at final figure)

First data-driven early warning system validated on historical epidemics at one facility; operational deployment not stated in source.

Venue PLoS ONE
Published 2021
Work type article
Authors David Harvey, Wessel Valkenburg, Amara Amara
Citations 34 (OpenAlex, at import time)
References 26
Model or method Gaussian Processes combined with Random Forest Regressors
Organization not stated in source
Primary source https://doi.org/10.1371/journal.pone.0253302
Open access gold
Keywords malaria, epidemic forecasting, machine learning, early warning, Burkina Faso
7 / 10

significant — thousands to millions affected

Malaria epidemic early warning could let decision makers intervene months ahead, potentially saving lives; first data-driven system, but validated at one facility with no stated scale.

Basis: inferred. Judged from the source text, which gives no explicit scale. Stated scale: not stated in source. Method and limits.

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