Practical fluorescence reconstruction microscopy for large samples and low-magnification imaging

Julienne LaChance, Daniel J. Cohen

PLoS Computational Biology 2020 article cited by 23

importance 4/10 ai assisted Cell Image Analysis Techniques cell biology imaging stage: research open-source model

Fluorescence reconstruction microscopy reduces phototoxicity and simplifies sample prep, but is complex to implement and existing benchmarks do not reflect practical value.

Practical FRM would enable safer imaging, free fluorescence channels and allow legacy data to be re-analyzed.

A convolutional neural network converts transmitted-light images into predicted epifluorescence images, evaluated against practical cell biology analyses including low-magnification screening data.

not stated in source

Qualitative demonstration that CNN-based FRM performs well for nuclei, cell-cell junctions and fine features at low magnification.

Venue PLoS Computational Biology
Published 2020
Work type article
Authors Julienne LaChance, Daniel J. Cohen
Citations 23 (OpenAlex, at import time)
References 49
Model or method convolutional neural network
Organization not stated in source
Primary source https://doi.org/10.1371/journal.pcbi.1008443
Open access gold
Keywords fluorescence reconstruction microscopy, convolutional neural network, phototoxicity, high-content imaging, low magnification
4 / 10

real but narrower advance

FRM reduces phototoxicity, simplifies prep and reuses legacy data in cell biology; practical benefit demonstrated with released code, but scope is limited to microscopy workflows and no scale is stated.

Basis: inferred. Judged from the source text, which gives no explicit scale. Stated scale: not stated in source. Method and limits.

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