Illuminating protein space with a programmable generative model

John Ingraham, Max Baranov, Zak Costello, Karl W. Barber, Wujie Wang, Ahmed Ismail, Vincent Frappier, Dana M. Lord et al.

Nature 2023 article cited by 432

importance 8/10 ai assisted Protein Structure and Dynamics protein science stage: research

The space of possible protein molecules is vastly larger than the space of functional ones, making it hard for computation and experiments to access proteins with desired properties and functions.

Designing novel proteins could unlock new medicines, materials and functions beyond those found in nature.

Chroma, a generative model using a polymer-aware diffusion process and sub-quadratic neural architecture, directly samples novel protein structures and sequences, steerable towards desired properties via conditioning.

not stated in source

Peer-reviewed Nature paper presenting a programmable generative model for protein design; abstract shows capabilities but no measured outcomes.

Venue Nature
Published 2023
Work type article
Authors John Ingraham, Max Baranov, Zak Costello, Karl W. Barber, Wujie Wang, Ahmed Ismail, Vincent Frappier, Dana M. Lord et al.
Citations 432 (OpenAlex, at import time)
References 54
Model or method Chroma (diffusion-based generative model)
Organization not stated in source
Primary source https://doi.org/10.1038/s41586-023-06728-8
Open access hybrid
Keywords protein design, generative model, diffusion, protein structures, Bayesian inference
8 / 10

major — millions of lives, an industry or a field

Protein design underpins potential new medicines, materials and functions beyond nature; abstract frames it as accessing a vastly larger functional protein space, a foundational capability.

Basis: inferred. Judged from the source text, which gives no explicit scale. Stated scale: not stated in source. Method and limits.

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