Deep Learning-Based TEM Image Analysis for Fully Automated Detection of Gold Nanoparticles Internalized Within Tumor Cell

Amrit Kaphle, Sandun Jayarathna, Hem Moktan, Maureen L. Aliru, Subhiksha Raghuram, Sunil Krishnan, Sang Hyun Cho

Microscopy and Microanalysis 2023 article cited by 16

importance 4/10 solved Cell Image Analysis Techniques cancer nanomedicine stage: research

Detecting gold nanoparticles inside tumor cells in TEM images is manual, slow, and error-prone with thresholding methods.

Quantifying nanoparticle uptake in tumor cells matters for nanomedicine research and cancer therapy development.

Deep learning models (YOLOv5 variants with transfer learning and tuned inputs) fully automated detection of gold nanoparticles from cellular TEM images.

Maximum F1 score of 0.982 achieved by the best-trained models; mean average precision also reported but abstract truncated.

The automated detector achieved near-perfect F1 on validation, replacing manual analysis per the abstract.

Venue Microscopy and Microanalysis
Published 2023
Work type article
Authors Amrit Kaphle, Sandun Jayarathna, Hem Moktan, Maureen L. Aliru, Subhiksha Raghuram, Sunil Krishnan, Sang Hyun Cho
Citations 16 (OpenAlex, at import time)
References 62
Model or method YOLO v5
Organization not stated in source
Primary source https://doi.org/10.1093/micmic/ozad066
Open access green
Keywords deep learning, TEM, gold nanoparticles, YOLOv5, tumor cells, automated detection
4 / 10

real but narrower advance

Abstract states the tool will benefit R&D on GNP-based cancer therapeutics; a research-enabling imaging advance, narrower than direct clinical or industry-scale impact.

Basis: stated. The source itself states the scale. Stated scale: not stated in source. Method and limits.

# Paper Year Citations Importance
1 AlphaFold Protein Structure Database: massively expanding the structural coverage of protein-sequence space with high-accuracy models
Mihály Váradi, Stephen Anyango, Mandar Deshpande, Sreenath Sasidharan...
2021 7,782
9
2 Evolutionary-scale prediction of atomic-level protein structure with a language model
Zeming Lin, Halil Akin, Roshan Rao, Brian Hie, Zhongkai Zhu, Wenting L...
2023 5,455
9
3 Accurate prediction of protein structures and interactions using a three-track neural network
Minkyung Baek, Frank DiMaio, Ivan V. Anishchenko, Justas Dauparas, Ser...
2021 5,468
9
4 De novo design of protein structure and function with RFdiffusion
Joseph L. Watson, David Juergens, Nathaniel R. Bennett, Brian L. Tripp...
2023 2,294
9
5 Structure Prediction and Computational Protein Design for Efficient Biocatalysts and Bioactive Proteins
Rebecca Buller, Jiřı́ Damborský, Donald Hilvert, Uwe T. Bornscheuer
2024 40
9